LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE012949

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE012949

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE012949AT4G32010.1HSI2-like 11positive
GWHGAAZE002150AT5G53970.1Tyrosine transaminase family protein-0.63negative
GWHGAAZE013631AT1G23360.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein-0.61negative
GWHGAAZE027703AT4G22580.1Exostosin family protein-0.6negative
GWHGAAZE032391AT2G44060.2Late embryogenesis abundant protein, group 2-0.6negative
GWHGAAZE012791AT1G64090.2Reticulan like protein B3-0.6negative
GWHGAAZE025907AT4G32890.1GATA transcription factor 9-0.6negative
GWHGAAZE012708AT4G21970.1Protein of unknown function, DUF584-0.59negative
GWHGAAZE026395AT1G62820.1Calcium-binding EF-hand family protein-0.58negative
GWHGAAZE018690AT3G54690.1Sugar isomerase (SIS) family protein-0.58negative
GWHGAAZE003195AT3G53750.1actin 3-0.58negative
GWHGAAZE006133AT4G11820.2hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase-0.58negative
GWHGAAZE009284AT5G59030.1copper transporter 1-0.58negative
GWHGAAZE003375AT1G61670.1Lung seven transmembrane receptor family protein-0.57negative
GWHGAAZE001703AT5G16530.1Auxin efflux carrier family protein-0.57negative
GWHGAAZE019346AT2G28100.1alpha-L-fucosidase 1-0.57negative
GWHGAAZE018531AT1G47480.1alpha/beta-Hydrolases superfamily protein-0.57negative
GWHGAAZE030830AT1G79640.1Protein kinase superfamily protein-0.56negative
GWHGAAZE010020ATMG00990.1NADH dehydrogenase 3-0.56negative
GWHGAAZE000720AT1G07420.1sterol 4-alpha-methyl-oxidase 2-1-0.56negative
GWHGAAZE007183AT3G12600.1nudix hydrolase homolog 16-0.56negative
GWHGAAZE005003AT1G54310.2S-adenosyl-L-methionine-dependent methyltransferases superfamily protein-0.56negative
GWHGAAZE013597AT3G28050.1nodulin MtN21 /EamA-like transporter family protein-0.56negative
GWHGAAZE004880AT1G05010.1ethylene-forming enzyme-0.56negative
GWHGAAZE006112AT1G12640.1MBOAT (membrane bound O-acyl transferase) family protein-0.56negative
GWHGAAZE022497AT4G17720.1RNA-binding (RRM/RBD/RNP motifs) family protein-0.56negative
GWHGAAZE005287AT4G20780.1calmodulin like 42-0.56negative
GWHGAAZE016160AT1G22760.1poly(A) binding protein 3-0.56negative
GWHGAAZE002328AT2G32380.1Transmembrane protein 97, predicted-0.56negative
GWHGAAZE030369AT3G18215.1Protein of unknown function, DUF599-0.56negative
GWHGAAZE006500AT5G42570.1B-cell receptor-associated 31-like-0.56negative


Expression profiling, GSEA and motif analysis