LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE016596

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE016596

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE016596AT4G31500.1cytochrome P450, family 83, subfamily B, polypeptide 11positive
GWHGAAZE010738AT3G59850.1Pectin lyase-like superfamily protein0.92positive
GWHGAAZE018115AT3G18215.1Protein of unknown function, DUF5990.92positive
GWHGAAZE001037AT4G26260.1myo-inositol oxygenase 40.91positive
GWHGAAZE018887AT5G05780.2RP non-ATPase subunit 8A0.91positive
GWHGAAZE013026AT2G47590.1photolyase/blue-light receptor 20.9positive
GWHGAAZE010866AT3G53150.1UDP-glucosyl transferase 73D10.9positive
GWHGAAZE020877AT3G14470.1NB-ARC domain-containing disease resistance protein0.9positive
GWHGAAZE012756AT1G48120.1hydrolases;protein serine/threonine phosphatases0.9positive
GWHGAAZE001726AT3G51570.1Disease resistance protein (TIR-NBS-LRR class) family0.9positive
GWHGAAZE010444AT2G25010.1Aminotransferase-like, plant mobile domain family protein0.9positive
GWHGAAZE021978----0.9positive
GWHGAAZE010810AT3G53150.1UDP-glucosyl transferase 73D10.9positive
GWHGAAZE013860----0.9positive
GWHGAAZE012409AT3G28410.1F-box/RNI-like superfamily protein0.9positive
GWHGAAZE029062AT4G34280.1transducin family protein / WD-40 repeat family protein0.9positive
GWHGAAZE028993AT4G16950.2Disease resistance protein (TIR-NBS-LRR class) family0.9positive
GWHGAAZE033738AT4G15560.1Deoxyxylulose-5-phosphate synthase0.9positive
GWHGAAZE022084AT5G18840.1Major facilitator superfamily protein0.9positive
GWHGAAZE007690----0.9positive
GWHGAAZE002714AT4G27450.1Aluminium induced protein with YGL and LRDR motifs0.89positive
GWHGAAZE006353AT4G17870.1Polyketide cyclase/dehydrase and lipid transport superfamily protein0.89positive
GWHGAAZE016116AT1G43670.1Inositol monophosphatase family protein0.89positive
GWHGAAZE020792AT3G59660.1C2 domain-containing protein / GRAM domain-containing protein0.89positive
GWHGAAZE001574AT3G48280.1cytochrome P450, family 71, subfamily A, polypeptide 250.89positive
GWHGAAZE010867AT3G53150.1UDP-glucosyl transferase 73D10.89positive
GWHGAAZE024688----0.88positive
GWHGAAZE020814AT3G59660.1C2 domain-containing protein / GRAM domain-containing protein0.88positive
GWHGAAZE014978AT4G35780.1ACT-like protein tyrosine kinase family protein0.87positive
GWHGAAZE025719AT5G56550.1oxidative stress 30.87positive
GWHGAAZE002687AT2G07505.1zinc ion binding0.87positive
GWHGAAZE011806AT3G22430.1RNA recognition motif XS domain protein;(source:Araport11)0.86positive
GWHGAAZE028014AT4G33990.1Tetratricopeptide repeat (TPR)-like superfamily protein0.86positive
GWHGAAZE031000AT4G29990.1Leucine-rich repeat transmembrane protein kinase protein0.86positive


Expression profiling, GSEA and motif analysis