LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE021094

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE021094

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE021094AT4G14130.1xyloglucan endotransglucosylase/hydrolase 151positive
GWHGAAZE021123AT4G14130.1xyloglucan endotransglucosylase/hydrolase 151positive
GWHGAAZE001332AT5G19440.1NAD(P)-binding Rossmann-fold superfamily protein0.92positive
GWHGAAZE015392AT5G57010.1calmodulin-binding family protein0.92positive
GWHGAAZE032751AT1G35710.1Protein kinase family protein with leucine-rich repeat domain0.91positive
GWHGAAZE025843AT3G51420.1strictosidine synthase-like 40.91positive
GWHGAAZE019783AT3G05650.1receptor like protein 320.9positive
GWHGAAZE013901AT4G34860.2Plant neutral invertase family protein0.89positive
GWHGAAZE027804AT4G17090.1chloroplast beta-amylase0.89positive
GWHGAAZE027187AT5G54380.1protein kinase family protein0.89positive
GWHGAAZE014533AT2G23690.1HTH-type transcriptional regulator;(source:Araport11)0.89positive
GWHGAAZE007323AT3G55130.1white-brown complex homolog 190.89positive
GWHGAAZE025325AT5G23240.1DNAJ heat shock N-terminal domain-containing protein0.88positive
GWHGAAZE015987AT1G21270.1wall-associated kinase 20.87positive
GWHGAAZE002953AT1G55850.1cellulose synthase like E10.87positive
GWHGAAZE016483AT5G42750.1BRI1 kinase inhibitor 10.87positive
GWHGAAZE008993AT5G65550.1UDP-Glycosyltransferase superfamily protein0.87positive
GWHGAAZE028464AT3G14090.1exocyst subunit exo70 family protein D30.87positive
GWHGAAZE016031AT1G21270.1wall-associated kinase 20.87positive
GWHGAAZE005309AT3G56400.1WRKY DNA-binding protein 700.87positive
GWHGAAZE020794AT3G02645.1Plant protein of unknown function (DUF247)0.87positive
GWHGAAZE002035AT2G30950.1FtsH extracellular protease family0.86positive
GWHGAAZE003809AT2G36000.1Mitochondrial transcription termination factor family protein0.86positive
GWHGAAZE011477AT2G29420.1glutathione S-transferase tau 70.86positive
GWHGAAZE015390AT1G13810.1Restriction endonuclease, type II-like superfamily protein0.86positive
GWHGAAZE029539AT4G20860.1FAD-binding Berberine family protein0.86positive
GWHGAAZE015388AT5G37160.1P-loop containing nucleoside triphosphate hydrolases superfamily protein0.86positive
GWHGAAZE013347AT1G06460.1alpha-crystallin domain 32.10.86positive
GWHGAAZE025971AT2G29760.1Tetratricopeptide repeat (TPR)-like superfamily protein0.86positive
GWHGAAZE028488----0.86positive


Expression profiling, GSEA and motif analysis