LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE024679

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE024679

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE024679AT5G28040.1DNA-binding storekeeper protein-related transcriptional regulator1positive
GWHGAAZE025039AT4G31810.1ATP-dependent caseinolytic (Clp) protease/crotonase family protein-0.62negative
GWHGAAZE003229AT3G55580.1Regulator of chromosome condensation (RCC1) family protein-0.62negative
GWHGAAZE018175AT5G04990.1SAD1/UNC-84 domain protein 1-0.61negative
GWHGAAZE032079AT5G34850.1purple acid phosphatase 26-0.61negative
GWHGAAZE010161ATCG01050.1NADH-Ubiquinone/plastoquinone (complex I) protein-0.59negative
GWHGAAZE008065AT5G64600.1O-fucosyltransferase family protein-0.59negative
GWHGAAZE000795AT5G59740.1UDP-N-acetylglucosamine (UAA) transporter family-0.58negative
GWHGAAZE010031ATMG00580.1NADH dehydrogenase subunit 4-0.58negative
GWHGAAZE010094ATMG00900.1cytochrome C biogenesis 256-0.58negative
GWHGAAZE021267AT5G02960.1Ribosomal protein S12/S23 family protein-0.58negative
GWHGAAZE017126AT4G30330.1Small nuclear ribonucleoprotein family protein-0.57negative
GWHGAAZE012775AT3G06240.1F-box family protein-0.57negative
GWHGAAZE033641ATCG00800.1structural constituent of ribosome-0.57negative
GWHGAAZE009201AT5G59740.1UDP-N-acetylglucosamine (UAA) transporter family-0.57negative
GWHGAAZE010090ATMG00270.1NADH dehydrogenase 6-0.56negative
GWHGAAZE010062ATMG00580.1NADH dehydrogenase subunit 4-0.56negative
GWHGAAZE025125AT3G03560.1hypothetical protein;(source:Araport11)-0.56negative
GWHGAAZE013484AT1G69380.1Protein of unknown function (DUF155)-0.56negative
GWHGAAZE011360AT5G36930.1Disease resistance protein (TIR-NBS-LRR class) family-0.56negative
GWHGAAZE010730AT1G27170.1transmembrane receptors;ATP binding-0.56negative
GWHGAAZE010110ATMG00270.1NADH dehydrogenase 6-0.56negative
GWHGAAZE030217AT4G38500.1Protein of unknown function (DUF616)-0.56negative
GWHGAAZE029813AT1G44910.1pre-mRNA-processing protein 40A-0.56negative
GWHGAAZE000850AT5G60030.1hypothetical protein;(source:Araport11)-0.56negative
GWHGAAZE010054ATMG00110.1cytochrome C biogenesis 206-0.56negative
GWHGAAZE003115AT3G07630.2arogenate dehydratase 2-0.56negative


Expression profiling, GSEA and motif analysis