LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE027192

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE027192

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE027192AT5G54310.1ARF-GAP domain 51positive
GWHGAAZE027193AT5G54310.1ARF-GAP domain 50.93positive
GWHGAAZE018427AT4G39150.2DNAJ heat shock N-terminal domain-containing protein0.92positive
GWHGAAZE014131AT4G39220.1Rer1 family protein0.91positive
GWHGAAZE014853AT2G18280.2tubby like protein 20.91positive
GWHGAAZE013974AT1G47270.1tubby like protein 60.91positive
GWHGAAZE000735AT5G59480.1Haloacid dehalogenase-like hydrolase (HAD) superfamily protein0.9positive
GWHGAAZE004891AT4G22320.2golgin family A protein;(source:Araport11)0.9positive
GWHGAAZE009598AT3G07080.1EamA-like transporter family0.9positive
GWHGAAZE004182----0.9positive
GWHGAAZE032091AT5G20350.1Ankyrin repeat family protein with DHHC zinc finger domain0.9positive
GWHGAAZE033106----0.9positive
GWHGAAZE002513AT1G55730.2cation exchanger 50.89positive
GWHGAAZE030346AT3G18040.1MAP kinase 90.89positive
GWHGAAZE006421AT1G35670.1calcium-dependent protein kinase 20.89positive
GWHGAAZE007247AT4G31350.2Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein0.89positive
GWHGAAZE029550AT5G35560.1DENN (AEX-3) domain-containing protein0.89positive
GWHGAAZE013494AT1G14000.1VH1-interacting kinase0.89positive
GWHGAAZE009081AT5G60760.1P-loop containing nucleoside triphosphate hydrolases superfamily protein0.89positive
GWHGAAZE024815AT3G61790.1Protein with RING/U-box and TRAF-like domains0.89positive
GWHGAAZE006137AT2G42010.1phospholipase D beta 10.89positive
GWHGAAZE014199AT1G58440.1FAD/NAD(P)-binding oxidoreductase family protein0.88positive
GWHGAAZE030012AT1G47740.2PPPDE putative thiol peptidase family protein0.88positive
GWHGAAZE024925AT4G00720.1shaggy-like protein kinase 320.88positive
GWHGAAZE000710AT5G59010.1Protein kinase protein with tetratricopeptide repeat domain0.88positive
GWHGAAZE019963AT2G38670.1phosphorylethanolamine cytidylyltransferase 10.88positive
GWHGAAZE015042AT3G51470.1Protein phosphatase 2C family protein0.88positive
GWHGAAZE003190AT2G39550.1Prenyltransferase family protein0.88positive
GWHGAAZE006112AT1G12640.1MBOAT (membrane bound O-acyl transferase) family protein0.88positive
GWHGAAZE030095AT4G34660.1SH3 domain-containing protein0.88positive
GWHGAAZE031303AT4G00110.1UDP-D-glucuronate 4-epimerase 30.88positive
GWHGAAZE012894AT3G10550.1Myotubularin-like phosphatases II superfamily0.88positive
GWHGAAZE021823AT2G33320.1Calcium-dependent lipid-binding (CaLB domain) family protein0.87positive
GWHGAAZE008861AT5G22030.2ubiquitin-specific protease 80.87positive
GWHGAAZE017113AT3G43120.1SAUR-like auxin-responsive protein family 0.87positive
GWHGAAZE024770AT3G07960.1Phosphatidylinositol-4-phosphate 5-kinase family protein0.87positive
GWHGAAZE003342AT2G13620.1cation/hydrogen exchanger 150.87positive
GWHGAAZE016645AT4G35790.2phospholipase D delta0.87positive
GWHGAAZE005398AT5G58640.1Selenoprotein, Rdx type0.87positive
GWHGAAZE030476AT3G48260.1with no lysine (K) kinase 30.87positive
GWHGAAZE032515AT2G41830.1Uncharacterized protein0.87positive
GWHGAAZE009176AT1G07850.1Protein of unknown function (DUF604)0.87positive
GWHGAAZE009430AT2G40620.1Basic-leucine zipper (bZIP) transcription factor family protein0.87positive
GWHGAAZE003151AT3G12620.2Protein phosphatase 2C family protein0.87positive
GWHGAAZE017223AT1G53760.1K+-H+ exchange-like protein;(source:Araport11)0.87positive
GWHGAAZE025568AT4G32510.1HCO3- transporter family0.87positive
GWHGAAZE023991AT5G08640.2flavonol synthase 10.87positive
GWHGAAZE028186AT2G24370.1Protein kinase protein with adenine nucleotide alpha hydrolases-like domain0.87positive
GWHGAAZE031162AT3G21180.1autoinhibited Ca(2+)-ATPase 90.87positive
GWHGAAZE003445AT1G76340.1golgi nucleotide sugar transporter 30.87positive
GWHGAAZE016820AT5G20680.3TRICHOME BIREFRINGENCE-LIKE 160.87positive
GWHGAAZE009346AT1G07220.1Arabidopsis thaliana protein of unknown function (DUF821)0.87positive
GWHGAAZE009302AT1G20010.1tubulin beta-5 chain0.87positive
GWHGAAZE016038AT5G52560.1UDP-sugar pyrophosphorylase0.87positive
GWHGAAZE005580AT3G09550.1Ankyrin repeat family protein0.87positive
GWHGAAZE005834AT1G33170.1S-adenosyl-L-methionine-dependent methyltransferases superfamily protein0.87positive
GWHGAAZE002745AT5G54240.1Protein of unknown function (DUF1223)0.87positive
GWHGAAZE012939AT5G04930.1aminophospholipid ATPase 10.87positive
GWHGAAZE005534AT2G37670.1Transducin/WD40 repeat-like superfamily protein0.86positive
GWHGAAZE007307AT4G37820.1transmembrane protein;(source:Araport11)0.86positive
GWHGAAZE005744AT2G36450.1Integrase-type DNA-binding superfamily protein0.86positive
GWHGAAZE020919AT3G59800.1stress response protein;(source:Araport11)0.86positive
GWHGAAZE014854AT4G32150.1vesicle-associated membrane protein 7110.86positive
GWHGAAZE024555AT3G46920.1Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain0.86positive
GWHGAAZE018981AT5G49160.1methyltransferase 10.86positive
GWHGAAZE002304AT5G54650.2formin homology50.86positive
GWHGAAZE017589AT1G79640.1Protein kinase superfamily protein0.86positive
GWHGAAZE024022AT5G08640.2flavonol synthase 10.86positive
GWHGAAZE024511AT4G32060.1calcium-binding EF hand family protein0.86positive
GWHGAAZE009444AT2G30505.1Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family0.86positive
GWHGAAZE009399AT2G13620.1cation/hydrogen exchanger 150.86positive
GWHGAAZE022283AT4G16480.1inositol transporter 40.86positive
GWHGAAZE015895AT1G21870.1golgi nucleotide sugar transporter 50.86positive
GWHGAAZE018462AT2G18470.1roline-rich extensin-like receptor kinase 40.86positive
GWHGAAZE029628AT4G35790.2phospholipase D delta0.86positive
GWHGAAZE030916AT1G80280.1alpha/beta-Hydrolases superfamily protein0.86positive
GWHGAAZE000495AT3G07330.1Cellulose-synthase-like C60.86positive
GWHGAAZE027570AT1G63640.2P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain0.86positive
GWHGAAZE029242AT5G27710.1T-box protein;(source:Araport11)0.86positive
GWHGAAZE024419AT1G22870.1Protein kinase family protein with ARM repeat domain0.86positive
GWHGAAZE032092AT5G20350.1Ankyrin repeat family protein with DHHC zinc finger domain0.86positive
GWHGAAZE027569AT1G63640.1P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain0.86positive
GWHGAAZE009960AT1G70540.1Plant invertase/pectin methylesterase inhibitor superfamily protein0.86positive
GWHGAAZE001193AT5G21050.1hyccin;(source:Araport11)0.86positive
GWHGAAZE010655AT3G12660.1FASCICLIN-like arabinogalactan protein 14 precursor0.86positive
GWHGAAZE028187AT2G24370.1Protein kinase protein with adenine nucleotide alpha hydrolases-like domain0.86positive
GWHGAAZE028446AT5G25880.1NADP-malic enzyme 30.86positive
GWHGAAZE024872AT4G00350.1MATE efflux family protein0.86positive
GWHGAAZE030831AT1G79640.2Protein kinase superfamily protein0.86positive
GWHGAAZE004239AT2G19440.1O-Glycosyl hydrolases family 17 protein0.86positive
GWHGAAZE030761AT1G08510.1fatty acyl-ACP thioesterases B0.86positive
GWHGAAZE021922AT1G04600.1myosin XI A0.86positive


Expression profiling, GSEA and motif analysis