LjaFGD


Co-expressed networks of Lonicera Japonica

The following network shows co-expression information of GWHGAAZE031081

Gene:
Yellow--query gene     Green--co-expressed genes     Grey--Genes without expression profile
Interaction line:
Pink--Genes positive co-expression relationship with target genes
Blue--Genes negative co-expression relationship with target genes
Grey--Genes without expression profile

show network details

Tissue preferential expression analysis

1.Nine Different Tissue:
youngest leaf  second leaf  mature leaf  Shoot apex  Stem  White floral bud  White flower  Green floral bud  Yellow flower  

   
Network Viewer With Differential Expressed Genes

1.Five stages of flowering:
Third green stage/Juvenile bud stage  
Complete white stage/Juvenile bud stage  
Silver flowering stage/Juvenile bud stage  
Gold flowering stage/Juvenile bud stage  
Complete white stage/Third green stage  
Silver flowering stage/Third green stage  
Gold flowering stage/Third green stage  
Silver flowering stage/Complete white stage  
Gold flowering stage/Complete white stage  
Gold flowering stage/Silver flowering stage  

2.Eight Different Stages of Development:
Leaf/stem
Juvenile_bud/stem
Third_green/stem
Second_white/stem
Silver_flowering/stem
Gold_flowering/stem
Tawny_withering/stem
Juvenile_bud/Leaf
Third_green/Leaf
Second_white/Leaf
Silver_flowering/Leaf
Gold_flowering/Leaf
Tawny_withering/Leaf
Third_green/Juvenile_bud
Second_white/Juvenile_bud
Silver_flowering/Juvenile_bud
Gold_flowering/Juvenile_bud
Tawny_withering/Juvenile_bud
Second_white/Third_green
Silver_flowering/Third_green
Gold_flowering/Third_green
Tawny_withering/Third_green
Silver_flowering/Second_white
Gold_flowering/Second_white
Tawny_withering/Second_white
Gold_flowering/Silver_flowering
Tawny_withering/Silver_flowering
Tawny_withering/Gold_flowering

3.Fresh buds or flowers at four different growth stages:
Whole_white_alabastrum_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Slightly_white_alabastrum(diploid)
Golden_flower_vs_Slightly_white_alabastrum(diploid)
Silvery_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Whole_white_alabastrum(diploid)
Golden_flower_vs_Silvery_flower(diploid)
Whole_white_alabastrum_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Slightly_white_alabastrum(tetraploid)
Golden_flower_vs_Slightly_white_alabastrum(tetraploid)
Silvery_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Whole_white_alabastrum(tetraploid)
Golden_flower_vs_Silvery_flower(tetraploid)



   

Co-expressed genes of GWHGAAZE031081

Co-expression relationship

IDOrtholog in ArabidopsisAnnotationPCCRelationship
GWHGAAZE031081AT5G38260.1Protein kinase superfamily protein1positive
GWHGAAZE000107AT1G24020.2MLP-like protein 4230.96positive
GWHGAAZE022197AT1G24020.2MLP-like protein 4230.95positive
GWHGAAZE025899AT5G25880.1NADP-malic enzyme 30.95positive
GWHGAAZE012261AT1G24020.2MLP-like protein 4230.94positive
GWHGAAZE001815AT1G12740.1cytochrome P450, family 87, subfamily A, polypeptide 20.94positive
GWHGAAZE010691AT1G60690.1NAD(P)-linked oxidoreductase superfamily protein0.94positive
GWHGAAZE013310AT3G52970.1cytochrome P450, family 76, subfamily G, polypeptide 10.93positive
GWHGAAZE001793AT2G29660.1zinc finger (C2H2 type) family protein0.93positive
GWHGAAZE001847AT3G14690.1cytochrome P450, family 72, subfamily A, polypeptide 150.92positive
GWHGAAZE016171AT5G09360.1laccase 140.92positive
GWHGAAZE011908AT1G03220.1Eukaryotic aspartyl protease family protein0.92positive
GWHGAAZE022195AT1G24020.2MLP-like protein 4230.92positive
GWHGAAZE001825AT1G12740.1cytochrome P450, family 87, subfamily A, polypeptide 20.92positive
GWHGAAZE029754AT2G15220.1Plant basic secretory protein (BSP) family protein0.91positive
GWHGAAZE016175AT5G09360.1laccase 140.91positive
GWHGAAZE014172AT1G59590.1ZCF370.91positive
GWHGAAZE020116AT5G36110.1cytochrome P450, family 716, subfamily A, polypeptide 10.91positive
GWHGAAZE031078AT1G66920.2Protein kinase superfamily protein0.91positive
GWHGAAZE002853----0.9positive
GWHGAAZE000403AT2G29420.1glutathione S-transferase tau 70.9positive
GWHGAAZE005461----0.9positive
GWHGAAZE003353AT5G05340.1Peroxidase superfamily protein0.9positive
GWHGAAZE024167AT1G78780.2pathogenesis-related family protein0.9positive
GWHGAAZE010621AT3G54420.1homolog of carrot EP3-3 chitinase0.89positive
GWHGAAZE009990AT3G62150.1P-glycoprotein 210.89positive
GWHGAAZE018279AT1G47670.1Transmembrane amino acid transporter family protein0.89positive
GWHGAAZE001788AT3G26040.1HXXXD-type acyl-transferase family protein0.89positive
GWHGAAZE006706AT1G78960.1lupeol synthase 20.89positive
GWHGAAZE004236AT4G13180.1NAD(P)-binding Rossmann-fold superfamily protein0.89positive
GWHGAAZE010617AT3G54420.1homolog of carrot EP3-3 chitinase0.88positive
GWHGAAZE026481AT2G40740.1WRKY DNA-binding protein 550.88positive
GWHGAAZE010693AT1G60690.1NAD(P)-linked oxidoreductase superfamily protein0.88positive
GWHGAAZE020115AT5G36110.1cytochrome P450, family 716, subfamily A, polypeptide 10.88positive
GWHGAAZE006877AT5G44410.1FAD-binding Berberine family protein0.88positive
GWHGAAZE022441AT1G14550.1Peroxidase superfamily protein0.88positive
GWHGAAZE023350AT4G37070.3Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein0.87positive
GWHGAAZE016155AT4G09760.2Protein kinase superfamily protein0.87positive
GWHGAAZE001794AT4G02780.1Terpenoid cyclases/Protein prenyltransferases superfamily protein0.87positive
GWHGAAZE031222AT1G28710.3Nucleotide-diphospho-sugar transferase family protein0.87positive
GWHGAAZE012263AT1G24020.2MLP-like protein 4230.87positive
GWHGAAZE031156AT2G29110.1glutamate receptor 2.80.87positive
GWHGAAZE012875AT2G36380.1pleiotropic drug resistance 60.87positive
GWHGAAZE006823AT5G39130.1RmlC-like cupins superfamily protein0.87positive
GWHGAAZE024475AT1G69550.1disease resistance protein (TIR-NBS-LRR class)0.86positive
GWHGAAZE023601AT3G22370.1alternative oxidase 1A0.86positive
GWHGAAZE019519AT1G16150.1wall associated kinase-like 40.86positive
GWHGAAZE029862AT5G10530.1Concanavalin A-like lectin protein kinase family protein0.86positive
GWHGAAZE022438AT1G14550.1Peroxidase superfamily protein0.86positive
GWHGAAZE021297AT2G36430.1Plant protein of unknown function (DUF247)0.86positive
GWHGAAZE028933AT3G43740.1Leucine-rich repeat (LRR) family protein0.86positive


Expression profiling, GSEA and motif analysis