PH01000001G2110's details annotation 1.Annotation ICBR annotation: DEAD-box ATP-dependent RNA helicase, putative, expressed
Blast result AT4G00660 : 0.00E+00 Blast annotation: RNAhelicase-like 8 2.Location Scaffold: PH01000001 Strand: - Region | Start | End | gene | 1388678 | 1396526 | mRNA | 1388678 | 1396526 | exon | 1388678 | 1389041 | exon | 1390048 | 1390136 | exon | 1391549 | 1391729 | exon | 1391833 | 1392084 | exon | 1393500 | 1393738 | exon | 1393868 | 1394102 | exon | 1394872 | 1394932 | exon | 1395847 | 1396526 | CDS | 1388850 | 1389041 | CDS | 1390048 | 1390136 | CDS | 1391549 | 1391729 | CDS | 1391833 | 1392084 | CDS | 1393500 | 1393738 | CDS | 1393868 | 1394102 | CDS | 1394872 | 1394932 | CDS | 1395847 | 1396130 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000393 | protein_prenylation SNF2 Transcription_Regulator(from iTAK) helicase activity, protein prenyltransferase activity, RNA_degradation ubiquitin-dependent protein catabolic process,
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF00270.28 | DEAD | 152 | 316 | PF00271.30 | Helicase_C | 351 | 459 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | RNA degradation | ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13] | ko03018 | K12614 |
10.Gene Ontology GO Accession | GO Annotation | GO:0003676 | nucleic acid binding | GO:0004386 | helicase activity | GO:0005524 | ATP binding | GO:0008026 | ATP-dependent helicase activity |
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