Gene details

Annotation of co-expression genes

PH01000010G3080's details annotation

1.Annotation

ICBR annotation: WD domain, G-beta repeat domain containing protein, expressed

Blast result AT3G21540 : 0.00E+00
Blast annotation: transducin family protein / WD-40 repeat family protein

2.Location

Scaffold: PH01000010
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001215	Valine,_leucine_and_isoleucine_biosynthesis heme_a_biosynthetic_process dihydroxy-acid dehydratase activity, branched chain family amino acid biosynthetic process, Pantothenate_and_CoA_biosynthesis oxidoreductase activity, acting on the CH-CH group of donors, Porphyrin_and_chlorophyll_metabolism ubiquitin ligase complex, Ribosome_biogenesis_in_eukaryotes
coexpression network	CFinderM001744	Ribosome_biogenesis_in_eukaryotes Aminoacyl-tRNA_biosynthesis threonyl-tRNA aminoacylation, threonine-tRNA ligase activity, tRNA aminoacylation, tRNA aminoacylation for protein translation, cellular protein metabolic process, RNA processing, ligase activity, forming aminoacyl-tRNA and related compounds,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Ribosome biogenesis in eukaryotes	U3 small nucleolar RNA-associated protein 12	ko03008	K14556

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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