Gene details

Annotation of co-expression genes

PH01000044G1520's details annotation

1.Annotation

ICBR annotation: pentatricopeptide repeat protein, putative, expressed

Blast result AT5G04810 : 2.00E-164
Blast annotation: pentatricopeptide (PPR) repeat-containing protein

2.Location

Scaffold: PH01000044
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000237	solute:hydrogen antiporter activity,
coexpression network	CFinderM000637	guanosine tetraphosphate metabolic process, carotenoid biosynthetic process, Carotenoid_biosynthesis Purine_metabolism
coexpression network	CFinderM000837	glutamyl-tRNA aminoacylation, guanosine tetraphosphate metabolic process, tRNA aminoacylation, Aminoacyl-tRNA_biosynthesis Porphyrin_and_chlorophyll_metabolism glutamate-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, tRNA binding, tRNA aminoacylation for protein translation,
coexpression network	CFinderM001247	CAMTA Transcription_Regulator(from PlantTFDB) superoxide metabolic process, Peroxisome Protein_export superoxide dismutase activity,
coexpression network	CFinderM001447	superoxide metabolic process, superoxide dismutase activity, Peroxisome

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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