PH01000070G1810's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G24890 : 4.20E-12
Blast annotation: -
2.Location
Scaffold: PH01000070
Strand: -
| Region | Start | End |
| gene | 1053345 | 1056264 |
| mRNA | 1053345 | 1056264 |
| exon | 1053345 | 1055399 |
| exon | 1055909 | 1056264 |
| CDS | 1054991 | 1055399 |
| CDS | 1055909 | 1056225 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000102 | trehalose biosynthetic process, |
| coexpression network | CFinderM001321 | GT66 GlycosylTransferases peroxisome_fission phenylalanyl-tRNA aminoacylation, integral_component_of_peroxisomal_membrane SAGA-type_complex tRNA aminoacylation, oligosaccharyl transferase activity, phenylalanine-tRNA ligase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.