CFinderM001321's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
GT66 GlycosylTransferases0.001311926GFam
peroxisome_fission0.017459933GO:0016559
phenylalanyl-tRNA aminoacylation,0.017459933GO:0006432
integral_component_of_peroxisomal_membrane0.023639494GO:0005779
SAGA-type_complex0.023639494GO:0070461
tRNA aminoacylation,0.041419638GO:0043039
oligosaccharyl transferase activity,0.048824428GO:0004576
phenylalanine-tRNA ligase activity,0.048824428GO:0004826

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000006G2790tRNA synthetase beta subunit family proteinAT1G72550 (0.00E+00)
PH01000070G1810-AT5G24890 (4.20E-12)
PH01000087G0720staurosporin and temperature sensitive 3-like bAT1G34130 (0.00E+00)
PH01000134G1030Yippee family putative zinc-binding proteinAT3G11230 (2.40E-40)
PH01000329G0870-AT4G33890 (1.10E-41)
PH01000541G0660Tetratricopeptide repeat (TPR)-like superfamily proteinAT1G15480 (5.00E-110)
PH01000718G0490-- (-)
PH01000732G0110RNA helicase 1AT4G15850 (5.00E-112)
PH01000915G0470CP12 domain-containing protein 3AT1G76560 (2.80E-19)
PH01001206G0600hydroxyproline-rich glycoprotein family proteinAT5G52430 (1.00E-21)
PH01001382G0310peroxin 11AAT1G47750 (1.40E-61)
PH01001932G0190Mitochondrial substrate carrier family proteinAT1G79900 (2.00E-103)
PH01002726G0040peptidasesAT1G34640 (1.30E-12)
PH01003838G0010FRA8 homologAT5G22940 (1.80E-75)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000102trehalose biosynthetic process,
details
CFinderM000139metabolic process,
transferase activity, transferring hexosyl groups,
cysteine metabolic process,
phenylalanyl-tRNA aminoacylation,
cysteine desulfurase activity,
phenylalanine-tRNA ligase activity,
details
CFinderM000274Arachidonic_acid_metabolism
oligopeptide transport,
L-serine metabolic process,
glycine metabolic process,
Glutathione_metabolism
details
CFinderM000466details
CFinderM000748protein glycosylation,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
GT66 GlycosylTransferases
Protein_processing_in_endoplasmic_reticulum
Regulation_of_autophagy
oligosaccharyl transferase activity,
dolichyl-diphosphooligosaccharide-protein glycotransferase activity,
details
CFinderM000749Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
protein glycosylation,
GT66 GlycosylTransferases
Protein_processing_in_endoplasmic_reticulum
oligosaccharyl transferase activity,
dolichyl-diphosphooligosaccharide-protein glycotransferase activity,
response to stress,
details
CFinderM000835phenylalanyl-tRNA aminoacylation,
aminoacyl-tRNA ligase activity,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
nucleotide binding,
magnesium ion binding,
cytoplasm,
GeBP Transcription_Regulator(from PlantTFDB)
RNA binding,
tRNA aminoacylation for protein translation,
ATP binding,
details
CFinderM000848GT66 GlycosylTransferases
phenylalanyl-tRNA aminoacylation,
tRNA aminoacylation,
oligosaccharyl transferase activity,
phenylalanine-tRNA ligase activity,
tRNA binding,
protein glycosylation,
Various_types_of_N-glycan_biosynthesis
Aminoacyl-tRNA_biosynthesis
N-Glycan_biosynthesis
details
CFinderM000941defense_response_signaling_pathway,_resistance_gene-dependent
phenylalanyl-tRNA aminoacylation,
defense response to bacterium,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
phenylalanine-tRNA ligase activity,
tRNA binding,
details
CFinderM001119cysteine-type peptidase activity,
ubiquitin thiolesterase activity,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001257oligosaccharyl transferase activity,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
protein glycosylation,
Protein_processing_in_endoplasmic_reticulum
GT66 GlycosylTransferases
membrane,
details
CFinderM001647phenylalanyl-tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
aminoacyl-tRNA ligase activity,
fumarate metabolic process,
nucleotide binding,
magnesium ion binding,
tricarboxylic acid cycle enzyme complex,
fumarate hydratase activity,
cytoplasm,
mitochondrial outer membrane,
RNA binding,
tricarboxylic acid cycle,
Carbon_fixation_pathways_in_prokaryotes
Citrate_cycle_(TCA_cycle)
lyase activity,
details
CFinderM001696phenylalanyl-tRNA aminoacylation,
microtubule,
mitochondrial outer membrane,
protein complex,
Fatty_acid_metabolism
Peroxisome
Aminoacyl-tRNA_biosynthesis
phenylalanine-tRNA ligase activity,
tRNA aminoacylation,
protein polymerization,
microtubule-based process,
tRNA binding,
details
CFinderM001860Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
Protein_processing_in_endoplasmic_reticulum
dolichyl-diphosphooligosaccharide-protein glycotransferase activity,
GT66 GlycosylTransferases
protein glycosylation,
protein N-linked glycosylation via asparagine,
phenylalanyl-tRNA aminoacylation,
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
oligosaccharyl transferase activity,
tRNA binding,
ER_membrane_protein_complex
Aminoacyl-tRNA_biosynthesis
endoplasmic reticulum membrane,
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides,
details
CFinderM001895phenylalanyl-tRNA aminoacylation,
mitochondrial outer membrane,
Aminoacyl-tRNA_biosynthesis
tRNA aminoacylation,
phenylalanine-tRNA ligase activity,
tRNA binding,
details

4.Expression profilings


Show details about module gene expression profiling