|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | cysteine-type peptidase activity, | 0.031312863 | GO:0008234 | | ubiquitin thiolesterase activity, | 0.031312863 | GO:0004221 | | Protein_processing_in_endoplasmic_reticulum | 0.040378107 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000002G4240 | Transducin/WD40 repeat-like superfamily protein | AT3G62770 (4.00E-137) | | PH01000134G1030 | Yippee family putative zinc-binding protein | AT3G11230 (2.40E-40) | | PH01000761G0580 | Nuclear pore localisation protein NPL4 | AT2G47970 (3.00E-131) | | PH01001678G0250 | ubiquitin-specific protease 23 | AT5G57990 (2.20E-65) | | PH01003264G0010 | Granulin repeat cysteine protease family protein | AT5G43060 (5.00E-112) | | PH01004356G0050 | SPla/RYanodine receptor (SPRY) domain-containing protein | AT1G35470 (1.30E-62) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000035 | ubiquitin-dependent protein catabolic process,
| details | | CFinderM000246 | Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM000351 | katanin_complex
SAGA-type_complex
| details | | CFinderM000356 | glutaminyl-tRNA aminoacylation,
Aminoacyl-tRNA_biosynthesis
glutamine-tRNA ligase activity,
tRNA aminoacylation,
C2H2 Transcription_Regulator(from PlantTFDB)
ligase activity, forming aminoacyl-tRNA and related compounds,
NAD+ ADP-ribosyltransferase activity,
tRNA aminoacylation for protein translation,
| details | | CFinderM001321 | GT66 GlycosylTransferases
peroxisome_fission
phenylalanyl-tRNA aminoacylation,
integral_component_of_peroxisomal_membrane
SAGA-type_complex
tRNA aminoacylation,
oligosaccharyl transferase activity,
phenylalanine-tRNA ligase activity,
| details |
4.Expression profilings |
