PH01000087G1010's details annotation 1.Annotation ICBR annotation: BTBN13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
Blast result AT3G19850 : 6.00E-120 Blast annotation: Phototropic-responsive NPH3 family protein 2.Location Scaffold: PH01000087 Strand: + Region | Start | End | gene | 747633 | 752951 | mRNA | 747633 | 752951 | exon | 747633 | 748757 | exon | 748855 | 750021 | exon | 752172 | 752951 | CDS | 748695 | 748757 | CDS | 748855 | 750021 | CDS | 752172 | 752612 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000068 | cellular protein modification process, ubiquitin-protein ligase activity, Ubiquitin_mediated_proteolysis binding, intracellular, protein binding, CE8 Carbohydrate_Esterases GH28 Glycoside_Hydrolases Alfin-like Transcription_Regulator(from iTAK) SWI/SNF-SWI3 Transcription_Regulator(from iTAK) TORC1_complex
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF03000.13 | NPH3 | 206 | 437 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0005515 | protein binding |
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