Gene details

Annotation of co-expression genes

PH01000092G0550's details annotation

1.Annotation

ICBR annotation: nicalin, putative, expressed

Blast result AT3G52640 : 6.90E-73
Blast annotation: Zn-dependent exopeptidases superfamily protein

2.Location

Scaffold: PH01000092
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000563	Fatty_acid_elongation Biosynthesis_of_unsaturated_fatty_acids oxidoreductase activity, acting on the CH-CH group of donors, NAK (from iTAK) integral to membrane, cytoplasm, Steroid_hormone_biosynthesis lipid metabolic process, protein processing, peroxiredoxin activity, antioxidant activity,
coexpression network	CFinderM001590	protein processing, peroxiredoxin activity, antioxidant activity, integral to membrane, Biosynthesis_of_unsaturated_fatty_acids Fatty_acid_elongation oxidoreductase activity, acting on the CH-CH group of donors, double-stranded RNA binding, ribonuclease III activity,
coexpression network	CFinderM001821	protein processing, mRNA_surveillance_pathway protein binding,
coexpression network	CFinderM001822	protein processing, PHD Transcription_Regulator(from iTAK)
coexpression network	CFinderM001857	protein processing, antioxidant activity, peroxiredoxin activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF05450.14	Nicastrin	249	303

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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