Function module details

CFinderM001821's details annotation

Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein

This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function Annotation	FDR	Gene Ontolog
protein processing,	0.00174918	GO:0016485
mRNA_surveillance_pathway	0.0255358	KEGG
protein binding,	0.045112449	GO:0005515

2.Module member annotation

Gene ID	Annotation	Arabidopsis ortholog (Blast e-value)
PH01000081G0220	-	AT4G14746 (1.40E-29)
PH01000092G0550	Zn-dependent exopeptidases superfamily protein	AT3G52640 (6.90E-73)
PH01000276G1300	RING/U-box superfamily protein	AT4G35840 (4.60E-58)
PH01000318G0140	Uncharacterised protein family (UPF0497)	AT1G17200 (7.60E-54)
PH01000686G0090	-	- (-)
PH01001209G0060	Ataxia telangiectasia-mutated and RAD3-related	AT5G40820 (5.20E-46)
PH01001962G0210	tetratricopeptide repeat (TPR)-containing protein	AT1G80410 (0.00E+00)

3.Direct connection functional modules

Module ID	Function Annotation	Overlap condition
CFinderM000188	ubiquitin-dependent protein catabolic process,	details
CFinderM000563	Fatty_acid_elongation Biosynthesis_of_unsaturated_fatty_acids oxidoreductase activity, acting on the CH-CH group of donors, NAK (from iTAK) integral to membrane, cytoplasm, Steroid_hormone_biosynthesis lipid metabolic process, protein processing, peroxiredoxin activity, antioxidant activity,	details
CFinderM000611	WNK_NRBP (from iTAK) PHD Transcription_Regulator(from iTAK)	details
CFinderM000862	DBP Transcription_Regulator(from iTAK) Golgi stack, GPI-anchor transamidase complex,	details
CFinderM000938	proton-transporting two-sector ATPase complex, proton-transporting domain, proton-transporting V-type ATPase, V0 domain, binding, mRNA_surveillance_pathway hydrogen ion transmembrane transporter activity, ATP hydrolysis coupled proton transport, TORC1_complex Phagosome Oxidative_phosphorylation phosphotransferase activity, alcohol group as acceptor, TOR_signaling rRNA_catabolic_process	details
CFinderM001055	NF-YB Transcription_Regulator(from PlantTFDB)	details
CFinderM001087	peroxiredoxin activity, antioxidant activity, Glutathione_metabolism metallopeptidase activity,	details
CFinderM001230	base-excision repair, mRNA_surveillance_pathway DNA repair,	details
CFinderM001231	cullin-RING ubiquitin ligase complex, RNA modification, ubiquitin-dependent protein catabolic process,	details
CFinderM001310	mRNA_surveillance_pathway binding,	details
CFinderM001484	RLK-Pelle_RLCK-VI (from iTAK) mRNA_surveillance_pathway	details
CFinderM001590	protein processing, peroxiredoxin activity, antioxidant activity, integral to membrane, Biosynthesis_of_unsaturated_fatty_acids Fatty_acid_elongation oxidoreductase activity, acting on the CH-CH group of donors, double-stranded RNA binding, ribonuclease III activity,	details
CFinderM001725	cellular protein metabolic process, MYB Transcription_Regulator(from PlantTFDB)	details
CFinderM001822	protein processing, PHD Transcription_Regulator(from iTAK)	details
CFinderM001853	peroxisome organization, integral_component_of_peroxisomal_membrane cullin-RING ubiquitin ligase complex, bZIP Transcription_Regulator(from PlantTFDB)	details
CFinderM001857	protein processing, antioxidant activity, peroxiredoxin activity,	details
CFinderM001893	Golgi-associated vesicle, Terpenoid_backbone_biosynthesis membrane coat, COPI vesicle coat, isoprenoid biosynthetic process,	details

4.Expression profilings