Gene details

Annotation of co-expression genes

PH01000177G0610's details annotation

1.Annotation

ICBR annotation: expressed_protein

Blast result AT5G39785 : 4.50E-90
Blast annotation: Protein of unknown function (DUF1666)

2.Location

Scaffold: PH01000177
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000606	histone_H2A_acetylation CTP biosynthetic process, histone_H4_acetylation protein neddylation, nucleoside_diphosphate_phosphorylation UTP biosynthetic process, GTP biosynthetic process, carbohydrate phosphorylation, chromatin remodeling,
coexpression network	CFinderM001692	TKL-Pl-4 (from iTAK) carbohydrate phosphorylation, Ribosome translation, galactose metabolic process, intracellular, galactokinase activity, Galactose_metabolism Amino_sugar_and_nucleotide_sugar_metabolism structural constituent of ribosome, kinase activity,
coexpression network	CFinderM001693	translation, Ribosome structural constituent of ribosome, intracellular,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF07891.11	DUF1666	893	1126

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003735	structural constituent of ribosome
GO:0005622	intracellular
GO:0005840	ribosome
GO:0006412	translation

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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