PH01000183G0180's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000183
Strand: +
| Region | Start | End |
| gene | 155001 | 159819 |
| mRNA | 155001 | 159819 |
| exon | 155001 | 155186 |
| exon | 155396 | 155517 |
| exon | 155865 | 155978 |
| exon | 156224 | 156278 |
| exon | 158719 | 159819 |
| CDS | 155124 | 155186 |
| CDS | 155396 | 155517 |
| CDS | 155865 | 155978 |
| CDS | 156224 | 156278 |
| CDS | 158719 | 159558 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000109 | Glyoxylate_and_dicarboxylate_metabolism Peroxisome FMN binding, Alanine,_aspartate_and_glutamate_metabolism Glycine,_serine_and_threonine_metabolism catalytic activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05553.10 | DUF761 | 370 | 391 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.