PH01000185G1170's details annotation
1.Annotation
ICBR annotation: glycosyl transferase 8 domain containing protein, putative, expressed
Blast result AT3G01040 : 0.00E+00
Blast annotation: galacturonosyltransferase 13
2.Location
Scaffold: PH01000185
Strand: +
| Region | Start | End |
| gene | 838849 | 842955 |
| mRNA | 838849 | 842955 |
| exon | 838849 | 839695 |
| exon | 840461 | 840616 |
| exon | 841202 | 841789 |
| exon | 841873 | 842175 |
| exon | 842640 | 842955 |
| CDS | 839504 | 839695 |
| CDS | 840461 | 840616 |
| CDS | 841202 | 841789 |
| CDS | 841873 | 842175 |
| CDS | 842640 | 842930 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001229 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01501.19 | Glyco_transf_8 | 148 | 479 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016757 | transferase activity, transferring glycosyl groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.