Gene details

Annotation of co-expression genes

PH01000273G0520's details annotation

1.Annotation

ICBR annotation: glycosyl hydrolase family 47 domain contain protein, expressed

Blast result AT1G30000 : 8.00E-156
Blast annotation: alpha-mannosidase 3

2.Location

Scaffold: PH01000273
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000894	regulation of ARF protein signal transduction, phospholipid transport, proton-transporting V-type ATPase, V0 domain, ATP hydrolysis coupled proton transport,
coexpression network	CFinderM001070	GTnc GlycosylTransferases checkpoint_clamp_complex cell_cycle_checkpoint DNA_damage_checkpoint cullin-RING ubiquitin ligase complex,
coexpression network	CFinderM001745	GT13 GlycosylTransferases Golgi membrane, mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, N-Glycan_biosynthesis Glycerolipid_metabolism Various_types_of_N-glycan_biosynthesis Glycerophospholipid_metabolism transferase activity, transferring acyl groups, acetylglucosaminyltransferase activity, protein glycosylation,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF01532.19	Glyco_hydro_47	142	504

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509	calcium ion binding
GO:0016020	membrane

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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