PH01000312G0430's details annotation
1.Annotation
ICBR annotation: DUF593 domain containing protein
Blast result AT1G08800 : 1.50E-31
Blast annotation: Protein of unknown function, DUF593
2.Location
Scaffold: PH01000312
Strand: -
| Region | Start | End |
| gene | 343936 | 347673 |
| mRNA | 343936 | 347673 |
| exon | 343936 | 345334 |
| exon | 345413 | 347673 |
| CDS | 343977 | 345334 |
| CDS | 345413 | 346430 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000043 | C3H Transcription_Regulator(from PlantTFDB) DNA repair, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04576.14 | Zein-binding | 492 | 581 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.