Gene details

Annotation of co-expression genes

PH01000362G0410's details annotation

1.Annotation

ICBR annotation: inner membrane protein, putative, expressed

Blast result AT5G62050 : 4.10E-61
Blast annotation: homolog of yeast oxidase assembly 1 (OXA1)

2.Location

Scaffold: PH01000362
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000111	protein insertion into membrane, ATP citrate synthase activity, succinate-CoA ligase (ADP-forming) activity, regulation_of_anion_transport voltage-gated anion channel activity, anion transport,
coexpression network	CFinderM000712	anion transport, regulation_of_anion_transport protein insertion into membrane, mitochondrial outer membrane, phosphopyruvate hydratase complex, voltage-gated anion channel activity, phosphopyruvate hydratase activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF02096.19	60KD_IMP	19	156

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Protein export	preprotein translocase subunit YidC	ko03060	K03217

10.Gene Ontology

GO Accession	GO Annotation
GO:0016021	integral to membrane
GO:0051205	protein insertion into membrane

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.