Gene details

Annotation of co-expression genes

PH01000401G0860's details annotation

1.Annotation

ICBR annotation: alpha-mannosidase 2, putative, expressed

Blast result AT5G14950 : 0.00E+00
Blast annotation: golgi alpha-mannosidase II

2.Location

Scaffold: PH01000401
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000346	GH38 Glycoside_Hydrolases protein-chromophore linkage, leucyl-tRNA aminoacylation, detection_of_visible_light mannose metabolic process, ABC_transporters N-Glycan_biosynthesis Various_types_of_N-glycan_biosynthesis Aminoacyl-tRNA_biosynthesis spliceosomal complex, leucine-tRNA ligase activity, mannosidase activity, aminoacyl-tRNA_editing_activity alpha-mannosidase activity, nuclear mRNA splicing, via spliceosome,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
Glycoside_Hydrolases	GH38

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
N-Glycan biosynthesis	alpha-mannosidase II [EC:3.2.1.114]	ko00510	K01231
Various types of N-glycan biosynthesis	alpha-mannosidase II [EC:3.2.1.114]	ko00513	K01231

10.Gene Ontology

GO Accession	GO Annotation
GO:0003824	catalytic activity
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004559	alpha-mannosidase activity
GO:0005975	carbohydrate metabolic process
GO:0006013	mannose metabolic process
GO:0008270	zinc ion binding
GO:0015923	mannosidase activity
GO:0030246	carbohydrate binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.