1.Module annotation (GSEA enrichment result) Function Annotation | FDR | Gene Ontolog | GH38 Glycoside_Hydrolases | 0.000937412 | GFam | protein-chromophore linkage, | 0.010379855 | GO:0018298 | leucyl-tRNA aminoacylation, | 0.010379855 | GO:0006429 | detection_of_visible_light | 0.010379855 | GO:0009584 | mannose metabolic process, | 0.0155637 | GO:0006013 | ABC_transporters | 0.031438329 | KEGG | N-Glycan_biosynthesis | 0.031438329 | KEGG | Various_types_of_N-glycan_biosynthesis | 0.031438329 | KEGG | Aminoacyl-tRNA_biosynthesis | 0.031438329 | KEGG | spliceosomal complex, | 0.034326145 | GO:0005681 | leucine-tRNA ligase activity, | 0.037892177 | GO:0004823 | mannosidase activity, | 0.037892177 | GO:0015923 | aminoacyl-tRNA_editing_activity | 0.037892177 | GO:0002161 | alpha-mannosidase activity, | 0.037892177 | GO:0004559 | nuclear mRNA splicing, via spliceosome, | 0.041014389 | GO:0000398 |
2.Module member annotation Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | PH01000013G2240 | phytochrome B | AT2G18790 (0.00E+00) | PH01000401G0860 | golgi alpha-mannosidase II | AT5G14950 (0.00E+00) | PH01000740G0570 | Pre-mRNA-processing-splicing factor | AT1G80070 (0.00E+00) | PH01001117G0600 | P-glycoprotein 20 | AT3G55320 (0.00E+00) | PH01001145G0360 | ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases | AT1G09620 (0.00E+00) | PH01002771G0400 | Calcium-binding EF-hand family protein | AT3G10300 (2.30E-89) |
3.Direct connection functional modules Module ID | Function Annotation | Overlap condition | CFinderM000402 | spliceosomal complex, nuclear mRNA splicing, via spliceosome, GRAS Transcription_Regulator(from PlantTFDB) protein binding, Spliceosome
| details |
4.Expression profilings |