PH01000445G0590's details annotation
1.Annotation
ICBR annotation: dihydrodipicolinate reductase, putative, expressed
Blast result AT3G59890 : 3.70E-21
Blast annotation: Dihydrodipicolinate reductase, bacterial/plant
2.Location
Scaffold: PH01000445
Strand: -
| Region | Start | End |
| gene | 417995 | 418780 |
| mRNA | 417995 | 418780 |
| exon | 417995 | 418393 |
| exon | 418739 | 418780 |
| CDS | 418115 | 418393 |
| CDS | 418739 | 418765 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase |
| GO:0009089 | lysine biosynthetic process via diaminopimelate |
| GO:0055114 | oxidation-reduction process |
| GO:0070402 | NADPH binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.