Gene details

Annotation of co-expression genes

PH01000460G0190's details annotation

1.Annotation

ICBR annotation: DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed

Blast result AT5G15700 : 0.00E+00
Blast annotation: DNA/RNA polymerases superfamily protein

2.Location

Scaffold: PH01000460
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000825	outer membrane, ATP binding, Mismatch_repair mismatched DNA binding, Mismatch_repair protein refolding, DNA-directed RNA polymerase activity, cellular protein metabolic process, nucleobase-containing compound metabolic process,
coexpression network	CFinderM001427	outer membrane, RLK-Pelle_DLSV (from iTAK) Protein_processing_in_endoplasmic_reticulum

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003677	DNA binding
GO:0003899	DNA-directed RNA polymerase activity
GO:0006351	transcription, DNA-dependent

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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