Gene details

Annotation of co-expression genes

PH01000549G0010's details annotation

1.Annotation

ICBR annotation: tetratricopeptide repeat domain containing protein, expressed

Blast result AT4G37460 : 3.60E-87
Blast annotation: Tetratricopeptide repeat (TPR)-like superfamily protein

2.Location

Scaffold: PH01000549
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000592	transcription, DNA-dependent, cytoplasm,
coexpression network	CFinderM001267	sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity, protein binding, myosin complex, motor activity, pentose-phosphate shunt, RNA_polymerase transcription, DNA-dependent, Pyrimidine_metabolism Purine_metabolism
coexpression network	CFinderM001505	bZIP Transcription_Regulator(from PlantTFDB) Spliceosome

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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