PH01000583G0440's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000583
Strand: -
| Region | Start | End |
| gene | 290243 | 296136 |
| mRNA | 290243 | 296136 |
| exon | 290243 | 296136 |
| CDS | 292719 | 294428 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000787 | TKL-Pl-3 (from iTAK) RLK-Pelle_LRR-II (from iTAK) RNA-directed RNA polymerase activity, protein phosphorylation, |
| coexpression network | CFinderM001068 | protein import into nucleus, histone deacetylation, RLK-Pelle_RLCK-VIIa-2 (from iTAK) histone deacetylase activity, |
| coexpression network | CFinderM001367 | histone deacetylation, protein import into nucleus, RLK-Pelle_RLCK-VIIa-2 (from iTAK) histone deacetylase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.