CFinderM000787's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
TKL-Pl-3 (from iTAK)0.001125158GFam
RLK-Pelle_LRR-II (from iTAK)0.005898317GFam
RNA-directed RNA polymerase activity,0.024456508GO:0003968
protein phosphorylation,0.028327365GO:0006468

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000035G1650RNA-dependent RNA polymerase 2AT4G11130 (0.00E+00)
PH01000166G0280protein kinase family protein / protein phosphatase 2C ( PP2C) family proteinAT2G40860 (0.00E+00)
PH01000569G0160NSP-interacting kinase 1AT5G16000 (0.00E+00)
PH01000583G0440-- (-)
PH01000815G0170Transcription factor jumonji (jmjC) domain-containing proteinAT3G07610 (6.20E-95)
PH01003930G0110Transducin/WD40 repeat-like superfamily proteinAT3G21060 (9.00E-172)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000995nucleus,
riboflavin kinase activity,
RLK-Pelle_LRR-II (from iTAK)
B3-ARF Transcription_Regulator(from iTAK)
ARF Transcription_Regulator(from PlantTFDB)
Riboflavin_metabolism
DNA_replication
Mismatch_repair
Nucleotide_excision_repair
riboflavin biosynthetic process,
response to hormone stimulus,
details
CFinderM001068protein import into nucleus,
histone deacetylation,
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
histone deacetylase activity,
details
CFinderM001205ribonucleoside_binding
transcription, DNA-dependent,
DNA-directed RNA polymerase activity,
Drug_metabolism_-_cytochrome_P450
Metabolism_of_xenobiotics_by_cytochrome_P450
Glutathione_metabolism
details
CFinderM001367histone deacetylation,
protein import into nucleus,
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
histone deacetylase activity,
details
CFinderM001625SNF2 Transcription_Regulator(from iTAK)
cellular_homeostasis
mitochondrial outer membrane,
RNA methylation,
Homologous_recombination
details
CFinderM001758nuclear pore,
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings