PH01000675G0560's details annotation
1.Annotation
ICBR annotation: purple acid phosphatase, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000675
Strand: -
| Region | Start | End |
| gene | 454428 | 457584 |
| mRNA | 454428 | 457584 |
| exon | 454428 | 457584 |
| CDS | 455137 | 455643 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000884 | Protein_processing_in_endoplasmic_reticulum GT48 GlycosylTransferases HB-other Transcription_Regulator(from PlantTFDB) HD-ZIP Transcription_Regulator(from PlantTFDB) Nucleotide_excision_repair proteasomal ubiquitin-dependent protein catabolic process, outer membrane-bounded periplasmic space, 1,3-beta-D-glucan synthase complex, (1->3)-beta-D-glucan biosynthetic process, nucleotide-excision repair, |
| coexpression network | CFinderM001217 | Regulation_of_autophagy |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.