Gene details

Annotation of co-expression genes

PH01000704G0390's details annotation

1.Annotation

ICBR annotation: ATP dependent DNA ligase family protein, putative, expressed

Blast result AT1G66730 : 5.00E-151
Blast annotation: DNA LIGASE 6

2.Location

Scaffold: PH01000704
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001581	WASH_complex DNA_ligation_involved_in_DNA_repair drug_binding DNA_ligase_activity DNA ligase (ATP) activity, DNA recombination, DNA repair,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003677	DNA binding
GO:0003909	DNA ligase activity
GO:0003910	DNA ligase (ATP) activity
GO:0005524	ATP binding
GO:0006281	DNA repair
GO:0006310	DNA recombination
GO:0051103	DNA ligation involved in DNA repair

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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