Gene details

Annotation of co-expression genes

PH01000705G0720's details annotation

1.Annotation

ICBR annotation: cell division control protein 48 homolog E, putative, expressed

Blast result AT5G03340 : 0.00E+00
Blast annotation: ATPase, AAA-type, CDC48 protein

2.Location

Scaffold: PH01000705
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000569	CMGC_Pl-Tthe (from iTAK) 1,3-beta-D-glucan synthase activity, 1,3-beta-D-glucan synthase complex, membrane, Regulation_of_autophagy
coexpression network	CFinderM001358	spliceosomal complex, nuclear mRNA splicing, via spliceosome,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Protein processing in endoplasmic reticulum	transitional endoplasmic reticulum ATPase	ko04141	K13525

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0005524	ATP binding
GO:0016787	hydrolase activity
GO:0017111	nucleoside-triphosphatase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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