CFinderM000569's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
CMGC_Pl-Tthe (from iTAK)0.001311926GFam
1,3-beta-D-glucan synthase activity,0.006697841GO:0003843
1,3-beta-D-glucan synthase complex,0.025201277GO:0000148
membrane,0.025201277GO:0016020
Regulation_of_autophagy0.04077228KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000010G0320early-responsive to dehydration stress protein (ERD4)AT4G35870 (0.00E+00)
PH01000026G0720protein kinase family protein / WD-40 repeat family proteinAT4G29380 (0.00E+00)
PH01000092G0350Ankyrin repeat family proteinAT2G01680 (1.00E-171)
PH01000143G0210-- (-)
PH01000213G1000NagB/RpiA/CoA transferase-like superfamily proteinAT3G07300 (2.00E-135)
PH01000243G0570ubiquitin family proteinAT2G17190 (9.00E-107)
PH01000639G0510-AT4G01290 (1.00E-81)
PH01000705G0720ATPase, AAA-type, CDC48 proteinAT5G03340 (0.00E+00)
PH01000855G0150NRAMP metal ion transporter family proteinAT5G03280 (3.00E-158)
PH01001235G0120zinc finger (C3HC4-type RING finger) family proteinAT5G60250 (1.10E-86)
PH01002010G0120glucan synthase-like 3AT2G31960 (1.70E-92)
PH01002010G0130glucan synthase-like 12AT5G13000 (0)
PH01002482G0220phytochrome and flowering time regulatory protein (PFT1)AT1G25540 (3.00E-157)
PH01005771G0040S-adenosyl-L-methionine-dependent methyltransferases superfamily proteinAT5G64030 (0)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000316RLK-Pelle_RLCK-IV (from iTAK)
AGC_NDR (from iTAK)
Jumonji Transcription_Regulator(from iTAK)
signal transducer activity,
details
CFinderM000584membrane,
TKL-Pl-6 (from iTAK)
TKL-Pl-4 (from iTAK)
1,3-beta-D-glucan synthase complex,
(1->3)-beta-D-glucan biosynthetic process,
RNA-dependent DNA replication,
details
CFinderM000779spliceosomal complex,
nuclear mRNA splicing, via spliceosome,
Spliceosome
details
CFinderM000919mRNA_cleavage_factor_complex
mRNA_polyadenylation
phytochelatin biosynthetic process,
response to metal ion,
nitrogen compound metabolic process,
Styrene_degradation
Regulation_of_autophagy
Aminobenzoate_degradation
Tryptophan_metabolism
Cyanoamino_acid_metabolism
glutathione gamma-glutamylcysteinyltransferase activity,
mRNA_binding
Nitrogen_metabolism
C3H Transcription_Regulator(from PlantTFDB)
GNAT Transcription_Regulator(from iTAK)
details
CFinderM0011231,3-beta-D-glucan synthase activity,
(1->3)-beta-D-glucan biosynthetic process,
1,3-beta-D-glucan synthase complex,
RNA-dependent DNA replication,
membrane,
RNA-directed DNA polymerase activity,
details
CFinderM001124AGC_NDR (from iTAK)
Spliceosome
details
CFinderM001217Regulation_of_autophagy
details
CFinderM001345C3H Transcription_Regulator(from PlantTFDB)
1,3-beta-D-glucan synthase complex,
catalase activity,
membrane,
(1->3)-beta-D-glucan biosynthetic process,
Tryptophan_metabolism
Glyoxylate_and_dicarboxylate_metabolism
Peroxisome
RNA-dependent DNA replication,
Methane_metabolism
details
CFinderM001358spliceosomal complex,
nuclear mRNA splicing, via spliceosome,
details
CFinderM001359CMGC_Pl-Tthe (from iTAK)
Regulation_of_autophagy
C2C2-Dof Transcription_Regulator(from iTAK)
Dof Transcription_Regulator(from PlantTFDB)
details
CFinderM001467HMG Transcription_Regulator(from iTAK)
details
CFinderM001680COPII_vesicle_coating
SET Transcription_Regulator(from iTAK)
potassium_ion_transmembrane_transport
details
CFinderM001701peroxisome_fission
integral_component_of_peroxisomal_membrane
RNA_transport
details

4.Expression profilings


Show details about module gene expression profiling