1.Module annotation (GSEA enrichment result)
Function Annotation FDR Gene Ontolog 1,3-beta-D-glucan synthase activity, 0.000171197 GO:0003843 (1->3)-beta-D-glucan biosynthetic process, 0.014039223 GO:0006075 1,3-beta-D-glucan synthase complex, 0.014039223 GO:0000148 RNA-dependent DNA replication, 0.014570022 GO:0006278 membrane, 0.03241904 GO:0016020 RNA-directed DNA polymerase activity, 0.040472285 GO:0003964
2.Module member annotation
3.Direct connection functional modules
Module ID Function Annotation Overlap condition CFinderM000316 RLK-Pelle_RLCK-IV (from iTAK) AGC_NDR (from iTAK) Jumonji Transcription_Regulator(from iTAK) signal transducer activity, details CFinderM000569 CMGC_Pl-Tthe (from iTAK) 1,3-beta-D-glucan synthase activity, 1,3-beta-D-glucan synthase complex, membrane, Regulation_of_autophagy details CFinderM000584 membrane, TKL-Pl-6 (from iTAK) TKL-Pl-4 (from iTAK) 1,3-beta-D-glucan synthase complex, (1->3)-beta-D-glucan biosynthetic process, RNA-dependent DNA replication, details CFinderM001124 AGC_NDR (from iTAK) Spliceosome details CFinderM001345 C3H Transcription_Regulator(from PlantTFDB) 1,3-beta-D-glucan synthase complex, catalase activity, membrane, (1->3)-beta-D-glucan biosynthetic process, Tryptophan_metabolism Glyoxylate_and_dicarboxylate_metabolism Peroxisome RNA-dependent DNA replication, Methane_metabolism details
4.Expression profilings
Created with Highcharts 4.1.6 Gene expression profiling among different tissue samples 0 2 4 6 leaf_SRR2035212 leaf_SRR2035327 leaf_SRR4450543_CK leaf_SRR4450545_Dehydration leaf_SRR4450547_Dehydration leaf_SRR4450549_Cold leaf_SRR4450551_Cold Leaf-2 Leaf_ERR105068 Root_1 Root_3 Root_5 Root_ERR105075 Rhizome Rhizome_ERR105074 culm_SRR1187864 shoot_SAM_A shoot_MIN_C shoot_YNO_A shoot_YNO_C shoot_MNO_A shoot_MNO_C shoot_SAM_C shoot_YIN_A shoot_YIN_C shoot_MIN_A shoot_SRR3050072 shoot_SRR3056056 shoot_SRR3521411 Shoot_A2 Shoot_B1 Shoot_B3 Shoot_C2 Shoot_D1 Shoot_D3 Bud_1 Bud_3 panicle_early_ERR105069 panicle_flowering_ERR105071 PH01000010G0320 PH01000106G0310 PH01000639G0510 PH01001580G0270 PH01002010G0120 PH01002010G0130 Highcharts.com