Gene details

Annotation of co-expression genes

PH01000719G0620's details annotation

1.Annotation

ICBR annotation: bromodomain containing protein, expressed

Blast result AT1G06230 : 2.30E-81
Blast annotation: global transcription factor group E4

2.Location

Scaffold: PH01000719
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000833	7-methylguanosine mRNA capping, mRNA processing, mRNA guanylyltransferase activity, Ubiquitin_mediated_proteolysis mRNA_surveillance_pathway
coexpression network	CFinderM001018	mitochondrial intermembrane space, CMGC_CK2 (from iTAK) mitochondrial electron transport, ubiquinol to cytochrome c, copper ion transport, ubiquinol-cytochrome-c reductase activity, copper chaperone activity, RNA-dependent DNA replication, Oxidative_phosphorylation Ribosome_biogenesis_in_eukaryotes
coexpression network	CFinderM001648	actin cytoskeleton, mitochondrial proton-transporting ATP synthase complex, coupling factor F(o), actin_filament_depolymerization ATP synthesis coupled proton transport, mRNA_surveillance_pathway hydrogen ion transmembrane transporter activity, actin binding,
coexpression network	CFinderM001671	Phagosome proton-transporting V-type ATPase, V1 domain, mitochondrial proton-transporting ATP synthase complex, coupling factor F(o), ion_transmembrane_transport hydrogen ion transmembrane transporter activity, proton-transporting ATPase activity, rotational mechanism,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005515	protein binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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