Gene details

Annotation of co-expression genes

PH01000791G0090's details annotation

1.Annotation

ICBR annotation: ribosomal protein L7/L12 C-terminal domain containing protein, expressed

Blast result AT3G06040 : 4.40E-34
Blast annotation: Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein

2.Location

Scaffold: PH01000791
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000111	protein insertion into membrane, ATP citrate synthase activity, succinate-CoA ligase (ADP-forming) activity, regulation_of_anion_transport voltage-gated anion channel activity, anion transport,
coexpression network	CFinderM000452	protein neddylation, Trihelix Transcription_Regulator(from PlantTFDB) cellular protein modification process, Ubiquitin_mediated_proteolysis small protein activating enzyme activity, calcium-dependent phospholipid binding,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00542.18	Ribosomal_L12	125	188

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003735	structural constituent of ribosome
GO:0005622	intracellular
GO:0005840	ribosome
GO:0006412	translation

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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