PH01000791G0590's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000791
Strand: -
| Region | Start | End |
| gene | 347218 | 348409 |
| mRNA | 347218 | 348409 |
| exon | 347218 | 347967 |
| exon | 348081 | 348409 |
| CDS | 347750 | 347967 |
| CDS | 348081 | 348270 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001412 | protein neddylation, PLATZ Transcription_Regulator(from iTAK) RLK-Pelle_LRR-VI-2 (from iTAK) cellular protein modification process, Ubiquitin_mediated_proteolysis RNA_degradation small protein activating enzyme activity, |
| coexpression network | CFinderM001413 | protein neddylation, IWS1 Transcription_Regulator(from iTAK) RLK-Pelle_LRR-VI-2 (from iTAK) C2C2-Dof Transcription_Regulator(from iTAK) Dof Transcription_Regulator(from PlantTFDB) Ubiquitin_mediated_proteolysis cellular protein modification process, small protein activating enzyme activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07491.10 | PPI_Ypi1 | 70 | 92 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.