CFinderM001413's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein neddylation,0.00546875GO:0045116
IWS1 Transcription_Regulator(from iTAK)0.014543734GFam
RLK-Pelle_LRR-VI-2 (from iTAK)0.014543734GFam
C2C2-Dof Transcription_Regulator(from iTAK)0.014543734GFam
Dof Transcription_Regulator(from PlantTFDB)0.014543734GFam
Ubiquitin_mediated_proteolysis0.029381521KEGG
cellular protein modification process,0.035427098GO:0006464
small protein activating enzyme activity,0.047603558GO:0008641

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000068G0150Transcription elongation factor (TFIIS) family proteinAT5G05140 (1.10E-44)
PH01000165G1550-AT5G56980 (7.30E-13)
PH01000209G0280E1 C-terminal related 1AT5G19180 (4.00E-176)
PH01000323G0330DOF zinc finger protein 2AT3G21270 (6.00E-26)
PH01000791G0590-- (-)
PH01001621G0250alpha/beta-Hydrolases superfamily proteinAT2G36290 (2.00E-85)
PH01001658G0380Leucine-rich repeat protein kinase family proteinAT4G18640 (3.40E-45)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000051Stilbenoid,_diarylheptanoid_and_gingerol_biosynthesis
protein neddylation,
steroid biosynthetic process,
Flavonoid_biosynthesis
cellular protein modification process,
transferase activity, transferring acyl groups other than amino-acyl groups,
small protein activating enzyme activity,
3-beta-hydroxy-delta5-steroid dehydrogenase activity,
details
CFinderM000052protein neddylation,
cellular protein modification process,
Ubiquitin_mediated_proteolysis
small protein activating enzyme activity,
calcium-dependent phospholipid binding,
details
CFinderM000150Dof Transcription_Regulator(from PlantTFDB)
PLATZ Transcription_Regulator(from iTAK)
RLK-Pelle_LRR-VI-2 (from iTAK)
C2C2-Dof Transcription_Regulator(from iTAK)
details
CFinderM000209proton-transporting ATP synthase complex, coupling factor F(o),
proton-transporting two-sector ATPase complex, proton-transporting domain,
protein neddylation,
Trihelix Transcription_Regulator(from PlantTFDB)
cellular protein modification process,
ATP hydrolysis coupled proton transport,
ATP synthesis coupled proton transport,
apoplast,
Ubiquitin_mediated_proteolysis
small protein activating enzyme activity,
nutrient reservoir activity,
hydrogen ion transmembrane transporter activity,
manganese ion binding,
serine-type peptidase activity,
details
CFinderM000258cellular protein modification process,
protein neddylation,
phosphopyruvate hydratase complex,
NF-YB Transcription_Regulator(from PlantTFDB)
PLATZ Transcription_Regulator(from iTAK)
RLK-Pelle_LRR-VI-2 (from iTAK)
details
CFinderM000342ERF Transcription_Regulator(from PlantTFDB)
AP2/ERF-ERF Transcription_Regulator(from iTAK)
details
CFinderM000386C2H2 Transcription_Regulator(from PlantTFDB)
GH18 Glycoside_Hydrolases
protein neddylation,
Tify Transcription_Regulator(from iTAK)
details
CFinderM000398protein neddylation,
exocyst,
apoplast,
cellular protein modification process,
exocytosis,
Ubiquitin_mediated_proteolysis
cysteine-type endopeptidase activity,
small protein activating enzyme activity,
details
CFinderM000450C2C2-Dof Transcription_Regulator(from iTAK)
Dof Transcription_Regulator(from PlantTFDB)
RLK-Pelle_L-LEC (from iTAK)
details
CFinderM000451protein neddylation,
Trihelix Transcription_Regulator(from PlantTFDB)
Ubiquitin_mediated_proteolysis
small protein activating enzyme activity,
cellular protein modification process,
details
CFinderM000452protein neddylation,
Trihelix Transcription_Regulator(from PlantTFDB)
cellular protein modification process,
Ubiquitin_mediated_proteolysis
small protein activating enzyme activity,
calcium-dependent phospholipid binding,
details
CFinderM000606histone_H2A_acetylation
CTP biosynthetic process,
histone_H4_acetylation
protein neddylation,
nucleoside_diphosphate_phosphorylation
UTP biosynthetic process,
GTP biosynthetic process,
carbohydrate phosphorylation,
chromatin remodeling,
details
CFinderM000654protein neddylation,
RLK-Pelle_CR4L (from iTAK)
cellular protein modification process,
Ubiquitin_mediated_proteolysis
details
CFinderM000663protein neddylation,
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
chromosome,
DNA topological change,
DNA metabolic process,
apoplast,
cellular protein modification process,
Ubiquitin_mediated_proteolysis
small protein activating enzyme activity,
DNA topoisomerase (ATP-hydrolyzing) activity,
details
CFinderM000742protein neddylation,
cellular protein modification process,
Ubiquitin_mediated_proteolysis
Cysteine_and_methionine_metabolism
Tify Transcription_Regulator(from iTAK)
details
CFinderM000903protein neddylation,
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
Ubiquitin_mediated_proteolysis
cellular protein modification process,
NAC Transcription_Regulator(from PlantTFDB)
details
CFinderM000904IWS1 Transcription_Regulator(from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
Steroid_biosynthesis
GPI anchor metabolic process,
details
CFinderM001022IWS1 Transcription_Regulator(from iTAK)
protein neddylation,
cellular protein modification process,
Ubiquitin_mediated_proteolysis
transcription, DNA-dependent,
small protein activating enzyme activity,
details
CFinderM001110Ubiquitin_mediated_proteolysis
acid-amino acid ligase activity,
protein neddylation,
cellular protein modification process,
small protein activating enzyme activity,
details
CFinderM001412protein neddylation,
PLATZ Transcription_Regulator(from iTAK)
RLK-Pelle_LRR-VI-2 (from iTAK)
cellular protein modification process,
Ubiquitin_mediated_proteolysis
RNA_degradation
small protein activating enzyme activity,
details

4.Expression profilings