PH01000803G0160's details annotation
1.Annotation
ICBR annotation: M16 domain containing zinc peptidase, putative, expressed
Blast result AT5G56730 : 0.00E+00
Blast annotation: Insulinase (Peptidase family M16) protein
2.Location
Scaffold: PH01000803
Strand: +
| Region | Start | End |
| gene | 106025 | 120076 |
| mRNA | 106025 | 120076 |
| exon | 106025 | 107978 |
| exon | 108081 | 108327 |
| exon | 108412 | 108537 |
| exon | 108795 | 108932 |
| exon | 109025 | 109162 |
| exon | 109278 | 109535 |
| exon | 111184 | 111253 |
| exon | 111460 | 111673 |
| exon | 111828 | 111933 |
| exon | 113289 | 113522 |
| exon | 113669 | 113833 |
| exon | 113916 | 114065 |
| exon | 114144 | 114235 |
| exon | 114400 | 114481 |
| exon | 114565 | 114648 |
| exon | 114747 | 114863 |
| exon | 114982 | 115056 |
| exon | 115477 | 115671 |
| exon | 117239 | 117319 |
| exon | 118282 | 118331 |
| exon | 119604 | 120076 |
| CDS | 107848 | 107978 |
| CDS | 108081 | 108327 |
| CDS | 108412 | 108537 |
| CDS | 108795 | 108932 |
| CDS | 109025 | 109162 |
| CDS | 109278 | 109535 |
| CDS | 111184 | 111253 |
| CDS | 111460 | 111673 |
| CDS | 111828 | 111933 |
| CDS | 113289 | 113522 |
| CDS | 113669 | 113833 |
| CDS | 113916 | 114065 |
| CDS | 114144 | 114235 |
| CDS | 114400 | 114481 |
| CDS | 114565 | 114648 |
| CDS | 114747 | 114863 |
| CDS | 114982 | 115056 |
| CDS | 115477 | 115671 |
| CDS | 117239 | 117319 |
| CDS | 118282 | 118331 |
| CDS | 119604 | 119700 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001218 | |
| coexpression network | CFinderM001506 | chromosome, centromeric region, mitosis, helicase activity, RNA_degradation |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00675.19 | Peptidase_M16 | 30 | 145 |
| PF05193.20 | Peptidase_M16_C | 184 | 316 |
| PF05193.20 | Peptidase_M16_C | 633 | 780 |
| PF06201.12 | PITH | 874 | 942 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0004222 | metalloendopeptidase activity |
| GO:0006508 | proteolysis |
| GO:0046872 | metal ion binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.