PH01000901G0320's details annotation 1.Annotation ICBR annotation: zinc finger, RING-type, putative, expressed
Blast result AT5G58787 : 2.30E-63 Blast annotation: RING/U-box superfamily protein 2.Location Scaffold: PH01000901 Strand: - Region | Start | End | gene | 223920 | 227279 | mRNA | 223920 | 227279 | exon | 223920 | 224728 | exon | 226809 | 227046 | exon | 227142 | 227279 | CDS | 224518 | 224728 | CDS | 226809 | 227046 | CDS | 227142 | 227184 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM001095 | protein binding, RLK-Pelle_LRR-VI-2 (from iTAK) Spliceosome RNA processing,
| coexpression network | CFinderM001511 | nuclear pore, nucleocytoplasmic transport, RNA processing, Ribosome_biogenesis_in_eukaryotes RNA_transport
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF13920.5 | zf-C3HC4_3 | 64 | 110 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0005515 | protein binding | GO:0008270 | zinc ion binding |
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