Annotation of co-expression genes

PH01000937G0190's details annotation

1.Annotation

ICBR annotation: ANTH domain containing protein

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000937
Strand: -

RegionStartEnd
gene145295153004
mRNA145295153004
exon145295147655
exon148996149050
exon152121153004
CDS146755147655
CDS148996149050
CDS152121152340

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networkCFinderM000074Ribosome
translation,
structural constituent of ribosome,
intracellular,

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.