PH01001035G0260's details annotation
1.Annotation
ICBR annotation: ZOS9-03 - C2H2 zinc finger protein, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001035
Strand: -
| Region | Start | End |
| gene | 221181 | 223901 |
| mRNA | 221181 | 223901 |
| exon | 221181 | 221657 |
| exon | 222223 | 222359 |
| exon | 222431 | 222477 |
| exon | 222859 | 222918 |
| exon | 223623 | 223901 |
| CDS | 221518 | 221657 |
| CDS | 222223 | 222359 |
| CDS | 222431 | 222477 |
| CDS | 222859 | 222918 |
| CDS | 223623 | 223646 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000592 | transcription, DNA-dependent, cytoplasm, |
| coexpression network | CFinderM001253 | CMGC_CLK (from iTAK) membrane, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.