PH01001090G0480's details annotation
1.Annotation
ICBR annotation: fructose-bisphospate aldolase isozyme, putative, expressed
Blast result AT2G01140 : 2.00E-180
Blast annotation: Aldolase superfamily protein
2.Location
Scaffold: PH01001090
Strand: +
| Region | Start | End |
| gene | 304823 | 308109 |
| mRNA | 304823 | 308109 |
| exon | 304823 | 305082 |
| exon | 306361 | 306630 |
| exon | 306733 | 306842 |
| exon | 306931 | 307021 |
| exon | 307391 | 307660 |
| exon | 307758 | 308109 |
| CDS | 304945 | 305082 |
| CDS | 306361 | 306630 |
| CDS | 306733 | 306842 |
| CDS | 306931 | 307021 |
| CDS | 307391 | 307660 |
| CDS | 307758 | 308036 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000226 | DDT Transcription_Regulator(from iTAK) glycolysis, fructose-bisphosphate aldolase activity, Methane_metabolism Carbon_fixation_in_photosynthetic_organisms Pentose_phosphate_pathway Fructose_and_mannose_metabolism Glycolysis_/_Gluconeogenesis |
| coexpression network | CFinderM000621 | glycolysis, fructose-bisphosphate aldolase activity, Pentose_phosphate_pathway Fructose_and_mannose_metabolism Carbon_fixation_in_photosynthetic_organisms Glycolysis_/_Gluconeogenesis Methane_metabolism DDT Transcription_Regulator(from iTAK) mitochondrial outer membrane, regulation_of_anion_transport anion transport, voltage-gated anion channel activity, catalytic activity, pyruvate kinase activity, potassium ion binding, |
| coexpression network | CFinderM001433 | positive_regulation_of_autophagy rRNA_catabolic_process proton-transporting V-type ATPase, V0 domain, proton-transporting two-sector ATPase complex, proton-transporting domain, ATP hydrolysis coupled proton transport, ribonuclease III activity, fructose-bisphosphate aldolase activity, double-stranded RNA binding, hydrogen ion transmembrane transporter activity, glycolysis, |
| coexpression network | CFinderM001434 | Oxidative_phosphorylation positive_regulation_of_autophagy phosphate-containing compound metabolic process, proton-transporting V-type ATPase, V0 domain, proton-transporting two-sector ATPase complex, proton-transporting domain, ATP hydrolysis coupled proton transport, glycolysis, fructose-bisphosphate aldolase activity, inorganic diphosphatase activity, hydrogen ion transmembrane transporter activity, |
| coexpression network | CFinderM001589 | PHD Transcription_Regulator(from iTAK) fructose-bisphosphate aldolase activity, glycolysis, |
| coexpression network | CFinderM001766 | proton-transporting ATP synthase complex, catalytic core F(1), mitochondrial proton-transporting ATP synthase complex, catalytic core F(1), proton-transporting two-sector ATPase complex, catalytic domain, mitochondrial outer membrane, ATP metabolic process, anion transport, ATP biosynthetic process, ATP_catabolic_process regulation_of_anion_transport proton transport, ATP synthesis coupled proton transport, fructose-bisphosphate aldolase activity, voltage-gated anion channel activity, ATP hydrolysis coupled proton transport, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, hydrogen ion transporting ATP synthase activity, rotational mechanism, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00274.18 | Glycolytic | 41 | 385 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Glycolysis / Gluconeogenesis | fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | ko00010 | K01623 |
| Pentose phosphate pathway | fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | ko00030 | K01623 |
| Fructose and mannose metabolism | fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | ko00051 | K01623 |
| Carbon fixation in photosynthetic organisms | fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | ko00710 | K01623 |
| Methane metabolism | fructose-bisphosphate aldolase, class I [EC:4.1.2.13] | ko00680 | K01623 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0004332 | fructose-bisphosphate aldolase activity |
| GO:0006096 | glycolysis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.