Gene details

Annotation of co-expression genes

PH01001091G0370's details annotation

1.Annotation

ICBR annotation: serine/threonine-protein kinase RIO-like, putative, expressed

Blast result AT3G51270 : 8.00E-146
Blast annotation: protein serine/threonine kinases;ATP binding;catalytics

2.Location

Scaffold: PH01001091
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000410	Ribosome_biogenesis_in_eukaryotes IWS1 Transcription_Regulator(from iTAK) tyrosine biosynthetic process, ribosomal_large_subunit_biogenesis ribosomal_large_subunit_export_from_nucleus small-subunit processome, cytoplasm,
coexpression network	CFinderM001132	IWS1 Transcription_Regulator(from iTAK) Ribosome_biogenesis_in_eukaryotes iron-sulfur cluster assembly, transcription, DNA-dependent,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Ribosome biogenesis in eukaryotes	RIO kinase 2 [EC:2.7.11.1]	ko03008	K07179

10.Gene Ontology

GO Accession	GO Annotation
GO:0003824	catalytic activity
GO:0004674	protein serine/threonine kinase activity
GO:0005524	ATP binding
GO:0006468	protein phosphorylation
GO:0016772	transferase activity, transferring phosphorus-containing groups

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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