PH01001112G0150's details annotation
1.Annotation
ICBR annotation: OsSub7 - Putative Subtilisin homologue
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001112
Strand: +
| Region | Start | End |
| gene | 77818 | 81690 |
| mRNA | 77818 | 81690 |
| exon | 77818 | 78772 |
| exon | 78936 | 79091 |
| exon | 81079 | 81690 |
| CDS | 78580 | 78772 |
| CDS | 78936 | 79091 |
| CDS | 81079 | 81419 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000075 | regulation of transcription, DNA-dependent, sequence-specific DNA binding transcription factor activity, integral to membrane, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05922.15 | Inhibitor_I9 | 31 | 77 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004252 | serine-type endopeptidase activity |
| GO:0006508 | proteolysis |
| GO:0042802 | identical protein binding |
| GO:0043086 | negative regulation of catalytic activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.