Gene details

Annotation of co-expression genes

PH01001135G0290's details annotation

1.Annotation

ICBR annotation: fanconi anemia L, putative, expressed

Blast result AT5G65740 : 3.20E-50
Blast annotation: zinc ion binding

2.Location

Scaffold: PH01001135
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001529	Fanconi_anaemia_nuclear_complex DNA repair, Ubiquitin_mediated_proteolysis

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Ubiquitin mediated proteolysis	E3 ubiquitin-protein ligase FANCL [EC:6.3.2.19]	ko04120	K10606

10.Gene Ontology

GO Accession	GO Annotation
GO:0004842	ubiquitin-protein ligase activity
GO:0006281	DNA repair
GO:0043240	Fanconi anaemia nuclear complex

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.