Gene details

Annotation of co-expression genes

PH01001159G0530's details annotation

1.Annotation

ICBR annotation: NOL1/NOP2/sun family protein, putative, expressed

Blast result AT2G22400 : 0.00E+00
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

2.Location

Scaffold: PH01001159
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001133	tRNA_(cytosine-5-)-methyltransferase_activity RNA modification, C3H Transcription_Regulator(from PlantTFDB)

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF01189.16	Methyltr_RsmB-F	195	381

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003723	RNA binding
GO:0008168	methyltransferase activity
GO:0016428	tRNA (cytosine-5-)-methyltransferase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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