Function module details

CFinderM001133's details annotation

Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein

This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function Annotation	FDR	Gene Ontolog
tRNA_(cytosine-5-)-methyltransferase_activity	0.009549111	GO:0016428
RNA modification,	0.014039223	GO:0009451
C3H Transcription_Regulator(from PlantTFDB)	0.020142381	GFam

2.Module member annotation

Gene ID	Annotation	Arabidopsis ortholog (Blast e-value)
PH01000128G0650	-	- (-)
PH01000630G0170	Methylthiotransferase	AT1G72090 (0.00E+00)
PH01000789G0020	Noc2p family	AT2G18220 (0.00E+00)
PH01001159G0530	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	AT2G22400 (0.00E+00)
PH01001852G0460	alpha/beta-Hydrolases superfamily protein	AT5G21950 (1.10E-50)
PH01004085G0080	-	AT2G06040 (9.70E-93)

3.Direct connection functional modules

Module ID	Function Annotation	Overlap condition
CFinderM001231	cullin-RING ubiquitin ligase complex, RNA modification, ubiquitin-dependent protein catabolic process,	details
CFinderM001667	spliceosomal_tri-snRNP_complex_assembly chromosome, centromeric region, U4/U6_x_U5_tri-snRNP_complex chromosome, DNA topological change, mitosis, nuclear mRNA splicing, via spliceosome,	details
CFinderM001855	Base_excision_repair GPI anchor metabolic process, DNA recombination,	details

4.Expression profilings