Gene details

Annotation of co-expression genes

PH01001172G0450's details annotation

1.Annotation

ICBR annotation: ABC transporter family protein, putative, expressed

Blast result AT2G47800 : 8.10E-36
Blast annotation: multidrug resistance-associated protein 4

2.Location

Scaffold: PH01001172
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000159	chitin binding, chitin catabolic process, cell wall macromolecule catabolic process, chitinase activity, ATP binding, ATPase activity, SNARE_interactions_in_vesicular_transport carbohydrate metabolic process, protein phosphorylation, transport, transmembrane transport, RLK-Pelle_LRR-VIII-1 (from iTAK) RLK-Pelle_LRK10L-2 (from iTAK)
coexpression network	CFinderM000160	RLK-Pelle_LRK10L-2 (from iTAK) SNARE_interactions_in_vesicular_transport transport, cell wall macromolecule catabolic process, chitin catabolic process, transmembrane transport,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00664.22	ABC_membrane	140	285

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005524	ATP binding
GO:0006810	transport
GO:0016021	integral to membrane
GO:0042626	ATPase activity, coupled to transmembrane movement of substances
GO:0055085	transmembrane transport

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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