Gene details

Annotation of co-expression genes

PH01001232G0310's details annotation

1.Annotation

ICBR annotation: cbxX, chromosomal, putative, expressed

Blast result AT3G24530 : 5.00E-159
Blast annotation: AAA-type ATPase family protein / ankyrin repeat family protein

2.Location

Scaffold: PH01001232
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001818	C2H2 Transcription_Regulator(from PlantTFDB) fatty-acyl-CoA binding,
coexpression network	CFinderM001878	isoprenoid biosynthetic process, mRNA_surveillance_pathway C2H2 Transcription_Regulator(from PlantTFDB) fatty-acyl-CoA binding,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0000166	nucleotide binding
GO:0005515	protein binding
GO:0005524	ATP binding
GO:0017111	nucleoside-triphosphatase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.