CFinderM001878's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
isoprenoid biosynthetic process,0.009153968GO:0008299
mRNA_surveillance_pathway0.0255358KEGG
C2H2 Transcription_Regulator(from PlantTFDB)0.033159637GFam
fatty-acyl-CoA binding,0.047531289GO:0000062

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000044G1970acyl-CoA binding protein 2AT4G27780 (2.70E-94)
PH01000312G0990protein phosphatase 2A-4AT3G58500 (2.00E-172)
PH01000918G0240zinc finger (C2H2 type) family proteinAT4G06634 (2.20E-96)
PH01001082G0140-AT5G19300 (1.80E-94)
PH01001232G0310AAA-type ATPase family protein / ankyrin repeat family proteinAT3G24530 (5.00E-159)
PH01001766G0240geranyl diphosphate synthase 1AT2G34630 (4.70E-96)
PH01004805G0020HCP-like superfamily proteinAT1G18260 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000076chromosome, centromeric region,
mitosis,
details
CFinderM000573fatty-acyl-CoA binding,
Others Transcription_Regulator(from iTAK)
signal transduction,
details
CFinderM000906HSF Transcription_Regulator(from PlantTFDB)
protein ADP-ribosylation,
dephosphorylation,
protein methylation,
Base_excision_repair
details
CFinderM000918GT48 GlycosylTransferases
RLK-Pelle_RLCK-V (from iTAK)
TKL-Pl-4 (from iTAK)
microtubule cytoskeleton organization,
(1->3)-beta-D-glucan biosynthetic process,
cytokinesis
1,3-beta-D-glucan synthase complex,
mRNA_surveillance_pathway
details
CFinderM000953fatty-acyl-CoA binding,
details
CFinderM000959RLK-Pelle_PERK-1 (from iTAK)
details
CFinderM001198RLK-Pelle_RLCK-VI (from iTAK)
Oxidative_phosphorylation
details
CFinderM001330selenium binding,
dephosphorylation,
protein tyrosine/serine/threonine phosphatase activity,
protein tyrosine phosphatase activity,
Endocytosis
mRNA_surveillance_pathway
phosphatase activity,
protein dephosphorylation,
cell redox homeostasis,
details
CFinderM001331protein dephosphorylation,
microtubule organizing center,
spindle pole,
dephosphorylation,
microtubule cytoskeleton organization,
C2H2 Transcription_Regulator(from PlantTFDB)
isoprenoid biosynthetic process,
selenium binding,
details
CFinderM001666integral to membrane,
C2H2 Transcription_Regulator(from PlantTFDB)
details
CFinderM001698Steroid_biosynthesis
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
sterol_24-C-methyltransferase_activity
single-stranded DNA binding,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
WRKY Transcription_Regulator(from PlantTFDB)
dephosphorylation,
steroid biosynthetic process,
details
CFinderM001818C2H2 Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
details
CFinderM001845protein complex,
microtubule,
PLATZ Transcription_Regulator(from iTAK)
Phagosome
mRNA_surveillance_pathway
CAMK_CAMKL-CHK1 (from iTAK)
protein polymerization,
microtubule-based process,
dephosphorylation,
details
CFinderM001854HSF Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
details
CFinderM001880RNA_transport
C2H2 Transcription_Regulator(from PlantTFDB)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
details
CFinderM001884single-stranded DNA binding,
DNA_replication
RNA processing,
details
CFinderM001886Steroid_biosynthesis
ubiquitin ligase complex,
sterol_24-C-methyltransferase_activity
dephosphorylation,
steroid biosynthetic process,
mRNA_surveillance_pathway
protein ubiquitination,
protein dephosphorylation,
details
CFinderM001897phosphatase activity,
mRNA_surveillance_pathway
dephosphorylation,
protein dephosphorylation,
protein ubiquitination,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
ubiquitin ligase complex,
details

4.Expression profilings